Health · Local MCP server

Clinvar MCP

Clinical variants from ClinVar. No key required.

What the MCP Registry states

The entry as published to the official MCP Registry (read 2026-10-04), latest version.

Registry name
io.github.mrfentmen/clinvar-mcp
Version
1.0.1
Status
Active
Category
health
Transport
stdio (local process)
Package
npm
Published
2026-09-21
Updated
2026-09-21
Publisher
mrfentmen (GitHub) · 687 servers with pages here
Namespace
Namespace verified by the MCP Registry via GitHub (github.com/mrfentmen) · how
Repository
github.com/mrfentmen/clinvar-mcp
Source
Registry API entry

Packages

RegistryPackageVersionTransportEnvironment variables
npmclinvar-mcp1.0.1stdioNone declared

How to connect Clinvar MCP

Clinvar MCP runs locally from a Node.js package published to the npm registry: clinvar-mcp version 1.0.1. It speaks MCP over stdio, so the client starts it as a program and talks to it through standard input and output. It needs Node.js; clients usually start it with npx - the usual command is npx -y clinvar-mcp@1.0.1.

In the mcpServers JSON format that many desktop and editor MCP clients read, the entry looks like this (placeholders in angle brackets):

{
  "mcpServers": {
    "clinvar-mcp": {
      "command": "npx",
      "args": [
        "-y",
        "clinvar-mcp@1.0.1"
      ]
    }
  }
}

Derived from the registry entry, not tested here. What the server does, and on what terms, is set by its publisher; check its repository or website before giving it access to your accounts or files. How to add an MCP server to an assistant · Before you connect

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